Merge master into staging-next

nixos/doc/manual/installation/installing-virtualbox-guest.xml

@@ -83,7 +83,7 @@
   VirtualBox settings (Machine / Settings / Shared Folders, then click on the
   "Add" icon). Add the following to the
   <literal>/etc/nixos/configuration.nix</literal> to auto-mount them. If you do
-  not add <literal>"nofail"</literal>, the system will no boot properly. The
+  not add <literal>"nofail"</literal>, the system will not boot properly. The
   same goes for disabling <literal>rngd</literal> which is normally used to get
   randomness but this does not work in virtual machines.
  </para>

nixos/modules/virtualisation/qemu-vm.nix

@@ -605,6 +605,10 @@ in
 
     virtualisation.bootDevice = mkDefault (driveDeviceName 1);
 
+    virtualisation.useEFIBoot = mkDefault
+      (config.boot.loader.systemd-boot.enable ||
+       config.boot.loader.efi.canTouchEfiVariables);
+
     virtualisation.pathsInNixDB = [ config.system.build.toplevel ];
 
     # FIXME: Consolidate this one day.

nixos/tests/systemd-boot.nix

@@ -9,7 +9,6 @@ with pkgs.lib;
 let
   common = {
     virtualisation.useBootLoader = true;
-    virtualisation.useEFIBoot = true;
     boot.loader.systemd-boot.enable = true;
     boot.loader.efi.canTouchEfiVariables = true;
     environment.systemPackages = [ pkgs.efibootmgr ];

pkgs/applications/misc/keystore-explorer/default.nix

@@ -0,0 +1,40 @@
+{ fetchzip, stdenv, jdk8, runtimeShell }:
+
+stdenv.mkDerivation rec {
+  version = "5.4.4";
+  pname = "keystore-explorer";
+  src = fetchzip {
+    url = "https://github.com/kaikramer/keystore-explorer/releases/download/v${version}/kse-544.zip";
+    sha256 = "01kpa8g6p6vcqq9y70w5bm8jbw4kp55pbywj2zrhgjibrhgjqi0b";
+  };
+
+  installPhase = ''
+    runHook preInstall
+
+    mkdir -p $out/bin
+    mkdir -p $out/share/keystore-explorer
+    cp -R icons licenses lib kse.jar $out/share/keystore-explorer/
+
+    # keystore-explorer's kse.sh tries to detect the path of Java by using
+    # Python on Darwin; just write our own start script to avoid unnecessary dependencies
+    cat > $out/bin/keystore-explorer <<EOF
+    #!${runtimeShell}
+    export JAVA_HOME=${jdk8.home}
+    exec ${jdk8}/bin/java -jar $out/share/keystore-explorer/kse.jar "\$@"
+    EOF
+    chmod +x $out/bin/keystore-explorer
+
+    runHook postInstall
+  '';
+
+  dontStrip = true;
+  dontBuild = true;
+  dontConfigure = true;
+
+  meta = {
+    description = "Open source GUI replacement for the Java command-line utilities keytool and jarsigner";
+    license = stdenv.lib.licenses.gpl3Only;
+    maintainers = [ stdenv.lib.maintainers.numinit ];
+    platforms = stdenv.lib.platforms.unix;
+  };
+}

pkgs/applications/radio/soapyaudio/default.nix

@@ -0,0 +1,31 @@
+{ stdenv, fetchFromGitHub, cmake, pkg-config
+, hamlib, rtaudio, alsaLib, libpulseaudio, libjack2, libusb1, soapysdr
+} :
+
+stdenv.mkDerivation rec {
+  pname = "soapyaudio";
+  version = "0.1.1";
+
+  src = fetchFromGitHub {
+    owner = "pothosware";
+    repo = "SoapyAudio";
+    rev = "soapy-audio-${version}";
+    sha256 = "0minlsc1lvmqm20vn5hb4im7pz8qwklfy7sbr2xr73xkrbqdahc0";
+  };
+
+  nativeBuildInputs = [ cmake pkg-config ];
+  buildInputs = [ hamlib rtaudio alsaLib libpulseaudio libjack2 libusb1 soapysdr ];
+
+  cmakeFlags = [
+    "-DSoapySDR_DIR=${soapysdr}/share/cmake/SoapySDR/"
+    "-DUSE_HAMLIB=ON"
+  ];
+
+  meta = with stdenv.lib; {
+    homepage = "https://github.com/pothosware/SoapyAudio";
+    description = "SoapySDR plugin for amateur radio and audio devices";
+    license = licenses.mit;
+    maintainers = with maintainers; [ numinit ];
+    platforms = platforms.linux;
+  };
+}

pkgs/development/compilers/flasm/default.nix

@@ -0,0 +1,30 @@
+{ stdenv, fetchzip, unzip, bison, flex, gperf, zlib }:
+
+stdenv.mkDerivation rec {
+  pname = "flasm";
+  version = "1.64";
+
+  src = fetchzip {
+    url = "https://www.nowrap.de/download/flasm16src.zip";
+    sha256 = "03hvxm66rb6rjwbr07hc3k7ia5rim2xlhxbd9qmcai9xwmyiqafg";
+    stripRoot = false;
+  };
+
+  makeFlags = [ "CC=cc" ];
+
+  nativeBuildInputs = [ unzip bison flex gperf ];
+
+  buildInputs = [ zlib ];
+
+  installPhase = ''
+    install -Dm755 flasm -t $out/bin
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Assembler and disassembler for Flash (SWF) bytecode";
+    homepage = "http://flasm.sourceforge.net/";
+    license = licenses.bsd2;
+    maintainers = with maintainers; [ siraben ];
+    platforms = platforms.all;
+  };
+}

pkgs/development/interpreters/octave/default.nix

@@ -23,15 +23,17 @@
 , fftwSinglePrec
 , zlib
 , curl
-, qrupdate
 , blas, lapack
-, arpack
+# These two should use the same lapack and blas as the above
+, qrupdate, arpack, suitesparse ? null
+# If set to true, the above 5 deps are overriden to use the blas and lapack
+# with 64 bit indexes support. If all are not compatible, the build will fail.
+, use64BitIdx ? false
 , libwebp
 , gl2ps
 , ghostscript ? null
 , hdf5 ? null
 , glpk ? null
-, suitesparse ? null
 , gnuplot ? null
 # - Include support for GNU readline:
 , enableReadline ? true
@@ -41,7 +43,7 @@
 , jdk ? null
 , python ? null
 , overridePlatforms ? null
-, sundials_2 ? null
+, sundials ? null
 # - Build Octave Qt GUI:
 , enableQt ? false
 , qtbase ? null
@@ -56,9 +58,42 @@
 , darwin
 }:
 
-assert (!blas.isILP64) && (!lapack.isILP64);
+let
-
+  # Not always evaluated
-mkDerivation rec {
+  blas' = if use64BitIdx then
+    blas.override {
+      isILP64 = true;
+    }
+  else
+    blas
+  ;
+  lapack' = if use64BitIdx then
+    lapack.override {
+      isILP64 = true;
+    }
+  else
+    lapack
+  ;
+  qrupdate' = qrupdate.override {
+    # If use64BitIdx is false, this override doesn't evaluate to a new
+    # derivation, as blas and lapack are not overriden.
+    blas = blas';
+    lapack = lapack';
+  };
+  arpack' = arpack.override {
+    blas = blas';
+    lapack = lapack';
+  };
+  # Not always suitesparse is required at all
+  suitesparse' = if suitesparse != null then
+    suitesparse.override {
+      blas = blas';
+      lapack = lapack';
+    }
+  else
+    null
+  ;
+in mkDerivation rec {
   version = "6.1.0";
   pname = "octave";
 
@@ -78,34 +113,36 @@ mkDerivation rec {
     fltk
     zlib
     curl
-    blas
+    blas'
-    lapack
+    lapack'
     libsndfile
     fftw
     fftwSinglePrec
     portaudio
-    qrupdate
+    qrupdate'
-    arpack
+    arpack'
     libwebp
     gl2ps
   ]
-  ++ (stdenv.lib.optionals enableQt [
+  ++ stdenv.lib.optionals enableQt [
     qtbase
     qtsvg
     qscintilla
-  ])
+  ]
-  ++ (stdenv.lib.optional (ghostscript != null) ghostscript)
+  ++ stdenv.lib.optionals (ghostscript != null) [ ghostscript ]
-  ++ (stdenv.lib.optional (hdf5 != null) hdf5)
+  ++ stdenv.lib.optionals (hdf5 != null) [ hdf5 ]
-  ++ (stdenv.lib.optional (glpk != null) glpk)
+  ++ stdenv.lib.optionals (glpk != null) [ glpk ]
-  ++ (stdenv.lib.optional (suitesparse != null) suitesparse)
+  ++ stdenv.lib.optionals (suitesparse != null) [ suitesparse' ]
-  ++ (stdenv.lib.optional (enableJava) jdk)
+  ++ stdenv.lib.optionals (enableJava) [ jdk ]
-  ++ (stdenv.lib.optional (sundials_2 != null) sundials_2)
+  ++ stdenv.lib.optionals (sundials != null) [ sundials ]
-  ++ (stdenv.lib.optional (gnuplot != null) gnuplot)
+  ++ stdenv.lib.optionals (gnuplot != null) [ gnuplot ]
-  ++ (stdenv.lib.optional (python != null) python)
+  ++ stdenv.lib.optionals (python != null) [ python ]
-  ++ (stdenv.lib.optionals (!stdenv.isDarwin) [ libGL libGLU libX11 ])
+  ++ stdenv.lib.optionals (!stdenv.isDarwin) [ libGL libGLU libX11 ]
-  ++ (stdenv.lib.optionals (stdenv.isDarwin) [ libiconv
+  ++ stdenv.lib.optionals stdenv.isDarwin [
-                                               darwin.apple_sdk.frameworks.Accelerate
+    libiconv
-                                               darwin.apple_sdk.frameworks.Cocoa ])
+    darwin.apple_sdk.frameworks.Accelerate
+    darwin.apple_sdk.frameworks.Cocoa
+  ]
   ;
   nativeBuildInputs = [
     pkgconfig
@@ -115,12 +152,12 @@ mkDerivation rec {
     fftwSinglePrec
     texinfo
   ]
-  ++ (stdenv.lib.optional (sundials_2 != null) sundials_2)
+  ++ stdenv.lib.optionals (sundials != null) [ sundials ]
-  ++ (stdenv.lib.optional enableJIT llvm)
+  ++ stdenv.lib.optionals enableJIT [ llvm ]
-  ++ (stdenv.lib.optionals enableQt [
+  ++ stdenv.lib.optionals enableQt [
     qtscript
     qttools
-  ])
+  ]
   ;
 
   doCheck = !stdenv.isDarwin;
@@ -128,14 +165,14 @@ mkDerivation rec {
   enableParallelBuilding = true;
 
   # See https://savannah.gnu.org/bugs/?50339
-  F77_INTEGER_8_FLAG = if blas.isILP64 then "-fdefault-integer-8" else "";
+  F77_INTEGER_8_FLAG = if use64BitIdx then "-fdefault-integer-8" else "";
 
   configureFlags = [
     "--with-blas=blas"
     "--with-lapack=lapack"
-    (if blas.isILP64 then "--enable-64" else "--disable-64")
+    (if use64BitIdx then "--enable-64" else "--disable-64")
   ]
-    ++ (if stdenv.isDarwin then [ "--enable-link-all-dependencies" ] else [ ])
+    ++ stdenv.lib.optionals stdenv.isDarwin [ "--enable-link-all-dependencies" ]
     ++ stdenv.lib.optionals enableReadline [ "--enable-readline" ]
     ++ stdenv.lib.optionals stdenv.isDarwin [ "--with-x=no" ]
     ++ stdenv.lib.optionals enableQt [ "--with-qt=5" ]
@@ -149,14 +186,20 @@ mkDerivation rec {
   '';
 
   passthru = {
-    inherit version;
     sitePath = "share/octave/${version}/site";
+    blas = blas';
+    lapack = lapack';
+    qrupdate = qrupdate';
+    arpack = arpack';
+    suitesparse = suitesparse';
+    inherit python;
+    inherit enableQt enableJIT enableReadline enableJava;
   };
 
   meta = {
     homepage = "https://www.gnu.org/software/octave/";
     license = stdenv.lib.licenses.gpl3Plus;
-    maintainers = with stdenv.lib.maintainers; [raskin];
+    maintainers = with stdenv.lib.maintainers; [ raskin doronbehar ];
     description = "Scientific Pragramming Language";
     # https://savannah.gnu.org/bugs/?func=detailitem&item_id=56425 is the best attempt to fix JIT
     broken = enableJIT;

pkgs/development/libraries/botan/2.0.nix

@@ -1,9 +1,9 @@
 { callPackage, ... } @ args:
 
 callPackage ./generic.nix (args // {
-  baseVersion = "2.9";
+  baseVersion = "2.17";
-  revision = "0";
+  revision = "2";
-  sha256 = "06fiyalvc68p11qqh953azx2vrbav5vr00yvcfp67p9l4csn8m9h";
+  sha256 = "0v0yiq0qxcrsn5b34j6bz8i6pds8dih2ds90ylmy1msm5gz7vqpb";
   postPatch = ''
     sed -e 's@lang_flags "@&--std=c++11 @' -i src/build-data/cc/{gcc,clang}.txt
   '';

pkgs/development/libraries/botan/default.nix

@@ -4,6 +4,7 @@ callPackage ./generic.nix (args // {
   baseVersion = "1.10";
   revision = "17";
   sha256 = "04rnha712dd3sdb2q7k2yw45sf405jyigk7yrjfr6bwd9fvgyiv8";
+  sourceExtension = "tgz";
   extraConfigureFlags = "--with-gnump";
   postPatch = ''
     sed -e 's@lang_flags "@&--std=c++11 @' -i src/build-data/cc/{gcc,clang}.txt

pkgs/development/libraries/botan/generic.nix

@@ -1,6 +1,7 @@
 { stdenv, fetchurl, python, bzip2, zlib, gmp, openssl, boost
 # Passed by version specific builders
 , baseVersion, revision, sha256
+, sourceExtension ? "tar.xz"
 , extraConfigureFlags ? ""
 , postPatch ? null
 , darwin
@@ -12,10 +13,10 @@ stdenv.mkDerivation rec {
   version = "${baseVersion}.${revision}";
 
   src = fetchurl {
-    name = "Botan-${version}.tgz";
+    name = "Botan-${version}.${sourceExtension}";
     urls = [
-       "http://files.randombit.net/botan/v${baseVersion}/Botan-${version}.tgz"
+       "http://files.randombit.net/botan/v${baseVersion}/Botan-${version}.${sourceExtension}"
-       "http://botan.randombit.net/releases/Botan-${version}.tgz"
+       "http://botan.randombit.net/releases/Botan-${version}.${sourceExtension}"
     ];
     inherit sha256;
   };

pkgs/development/libraries/qrupdate/default.nix

@@ -25,10 +25,10 @@ stdenv.mkDerivation rec {
       "BLAS=-L${blas}/lib -lblas"
       "PREFIX=${placeholder "out"}"
       ${stdenv.lib.optionalString blas.isILP64
-      # Use their FFLAGS along with `-fdefault-integer-8`. If another
+      # If another application intends to use qrupdate compiled with blas with
-      # application intends to use arpack, it should add this to it's FFLAGS as
+      # 64 bit support, it should add this to it's FFLAGS as well. See (e.g):
-      # well. Otherwise (e.g): https://savannah.gnu.org/bugs/?50339
+      # https://savannah.gnu.org/bugs/?50339
-      "FFLAGS=-fimplicit-none -O3 -funroll-loops -fdefault-integer-8"
+      "FFLAGS=-fdefault-integer-8"
       }
     )
   '';

pkgs/development/libraries/sundials/2.x.nix

@@ -1,59 +0,0 @@
-{ stdenv
-, cmake
-, fetchurl
-, python
-# GNU Octave needs KLU for ODE solvers
-, suitesparse
-, blas, lapack
-, gfortran
-, lapackSupport ? true }:
-
-assert (!blas.isILP64) && (!lapack.isILP64);
-
-stdenv.mkDerivation rec {
-  pname = "sundials";
-  version = "2.7.0";
-
-  buildInputs = [ python ] ++ stdenv.lib.optionals (lapackSupport) [
-    gfortran
-    suitesparse
-  ];
-  nativeBuildInputs = [ cmake ];
-
-  src = fetchurl {
-    url = "https://computation.llnl.gov/projects/${pname}/download/${pname}-${version}.tar.gz";
-    sha256 = "01513g0j7nr3rh7hqjld6mw0mcx5j9z9y87bwjc16w2x2z3wm7yk";
-  };
-
-  patches = [
-    (fetchurl {
-      # https://github.com/LLNL/sundials/pull/19
-      url = "https://github.com/LLNL/sundials/commit/1350421eab6c5ab479de5eccf6af2dcad1eddf30.patch";
-      sha256 = "0g67lixp9m85fqpb9rzz1hl1z8ibdg0ldwq5z6flj5zl8a7cw52l";
-    })
-  ];
-
-  cmakeFlags = [
-    "-DEXAMPLES_INSTALL_PATH=${placeholder "out"}/share/examples"
-  ] ++ stdenv.lib.optionals (lapackSupport) [
-    "-DSUNDIALS_INDEX_TYPE=int32_t"
-    # GNU Octave needs KLU for ODE solvers
-    "-DKLU_ENABLE=ON"
-    "-DKLU_INCLUDE_DIR=${suitesparse}/include"
-    "-DKLU_LIBRARY_DIR=${suitesparse}/lib"
-    "-DLAPACK_ENABLE=ON"
-    "-DLAPACK_LIBRARIES=${lapack}/lib/lapack${stdenv.hostPlatform.extensions.sharedLibrary};${blas}/lib/blas${stdenv.hostPlatform.extensions.sharedLibrary}"
-  ];
-
-  # flaky tests, and patch in https://github.com/LLNL/sundials/pull/21 doesn't apply cleanly for sundials_3
-  doCheck = false;
-  checkPhase = "make test";
-
-  meta = with stdenv.lib; {
-    description = "Suite of nonlinear differential/algebraic equation solvers";
-    homepage    = "https://computation.llnl.gov/projects/sundials";
-    platforms   = platforms.all;
-    maintainers = with maintainers; [ idontgetoutmuch ];
-    license     = licenses.bsd3;
-  };
-}

pkgs/development/ocaml-modules/opam-format/default.nix

@@ -3,6 +3,8 @@
 buildDunePackage rec {
   pname = "opam-format";
 
+  useDune2 = true;
+
   inherit (opam-core) src version;
 
   minimumOCamlVersion = "4.02.3";

pkgs/development/ocaml-modules/opam-repository/default.nix

@@ -5,6 +5,8 @@ buildDunePackage rec {
 
   minimumOCamlVersion = "4.02";
 
+  useDune2 = true;
+
   inherit (opam-format) src version;
 
   patches = [ ./download-tool.patch ];

pkgs/development/ocaml-modules/opam-state/default.nix

@@ -5,6 +5,8 @@ buildDunePackage rec {
 
   inherit (opam) src version;
 
+  useDune2 = true;
+
   # get rid of check for curl at configure time
   # opam-state does not call curl at run time
   configureFlags = [ "--disable-checks" ];

pkgs/games/mindustry/default.nix

@@ -22,14 +22,14 @@ let
   # Note: when raising the version, ensure that all SNAPSHOT versions in
   # build.gradle are replaced by a fixed version
   # (the current one at the time of release) (see postPatch).
-  version = "120.2";
+  version = "121.4";
   buildVersion = makeBuildVersion version;
 
   src = fetchFromGitHub {
     owner = "Anuken";
     repo = "Mindustry";
     rev = "v${version}";
-    sha256 = "01a7qpwfr1n540fk0k65kl03biix0gmg66z7qn22mb2703laq1xc";
+    sha256 = "14w0fkn8q5bj84py7vx33wdk9d37ncrq6rdj5ryz4mvlxbix2n4n";
   };
 
   desktopItem = makeDesktopItem {
@@ -74,7 +74,7 @@ let
     '';
     outputHashAlgo = "sha256";
     outputHashMode = "recursive";
-    outputHash = "1yv9l8zdml6drmvlgv45w3qas9qmb654x4kja3an4d16k020khr7";
+    outputHash = "18n671aa013cnsnp9aaw61llqz4s4vn7zgja8cazd0cg632x8jca";
   };
 
   # Separate commands for building and installing the server and the client

pkgs/games/steam/fhsenv.nix

@@ -6,6 +6,7 @@
 , nativeOnly ? false
 , runtimeOnly ? false
 , runtimeShell
+, stdenv
 
 # DEPRECATED
 , withJava ? config.steam.java or false
@@ -43,22 +44,32 @@ let
       ++ lib.optional withPrimus primus
       ++ extraPkgs pkgs;
 
-  ldPath = map (x: "/steamrt/${steam-runtime-wrapped.arch}/" + x) steam-runtime-wrapped.libs
+  ldPath = lib.optionals stdenv.is64bit [ "/lib64" ]
-           ++ lib.optionals (steam-runtime-wrapped-i686 != null) (map (x: "/steamrt/${steam-runtime-wrapped-i686.arch}/" + x) steam-runtime-wrapped-i686.libs);
+  ++ [ "/lib32" ]
+  ++ map (x: "/steamrt/${steam-runtime-wrapped.arch}/" + x) steam-runtime-wrapped.libs
+  ++ lib.optionals (steam-runtime-wrapped-i686 != null) (map (x: "/steamrt/${steam-runtime-wrapped-i686.arch}/" + x) steam-runtime-wrapped-i686.libs);
 
   # Zachtronics and a few other studios expect STEAM_LD_LIBRARY_PATH to be present
   exportLDPath = ''
-    export LD_LIBRARY_PATH=/lib32:/lib64:${lib.concatStringsSep ":" ldPath}''${LD_LIBRARY_PATH:+:}$LD_LIBRARY_PATH
+    export LD_LIBRARY_PATH=${lib.concatStringsSep ":" ldPath}''${LD_LIBRARY_PATH:+:}$LD_LIBRARY_PATH
     export STEAM_LD_LIBRARY_PATH="$STEAM_LD_LIBRARY_PATH''${STEAM_LD_LIBRARY_PATH:+:}$LD_LIBRARY_PATH"
   '';
 
+  # bootstrap.tar.xz has 444 permissions, which means that simple deletes fail
+  # and steam will not be able to start
+  fixBootstrap = ''
+    if [ -r $HOME/.local/share/Steam/bootstrap.tar.xz ]; then
+      chmod +w $HOME/.local/share/Steam/bootstrap.tar.xz
+    fi
+  '';
+
   setupSh = writeScript "setup.sh" ''
     #!${runtimeShell}
   '';
 
   runSh = writeScript "run.sh" ''
     #!${runtimeShell}
-    runtime_paths="/lib32:/lib64:${lib.concatStringsSep ":" ldPath}"
+    runtime_paths="${lib.concatStringsSep ":" ldPath}"
     if [ "$1" == "--print-steam-runtime-library-paths" ]; then
       echo "$runtime_paths''${LD_LIBRARY_PATH:+:}$LD_LIBRARY_PATH"
       exit 0
@@ -226,7 +237,7 @@ in buildFHSUserEnv rec {
     mkdir -p $out/share/applications
     ln -s ${steam}/share/icons $out/share
     ln -s ${steam}/share/pixmaps $out/share
-    sed "s,/usr/bin/steam,steam,g" ${steam}/share/applications/steam.desktop > $out/share/applications/steam.desktop
+    ln -s ${steam}/share/applications/steam.desktop $out/share/applications/steam.desktop
   '';
 
   profile = ''
@@ -261,6 +272,7 @@ in buildFHSUserEnv rec {
       fi
     fi
     ${lib.optionalString (!nativeOnly) exportLDPath}
+    ${fixBootstrap}
     exec steam "$@"
   '';
 
@@ -287,6 +299,7 @@ in buildFHSUserEnv rec {
       fi
       shift
       ${lib.optionalString (!nativeOnly) exportLDPath}
+      ${fixBootstrap}
       exec -- "$run" "$@"
     '';
   };

pkgs/games/steam/steam.nix

@@ -2,7 +2,7 @@
 
 let
   traceLog = "/tmp/steam-trace-dependencies.log";
-  version = "1.0.0.61";
+  version = "1.0.0.68";
 
 in stdenv.mkDerivation {
   pname = "steam-original";
@@ -10,7 +10,7 @@ in stdenv.mkDerivation {
 
   src = fetchurl {
     url = "https://repo.steampowered.com/steam/pool/steam/s/steam/steam_${version}.tar.gz";
-    sha256 = "0c5xy57gwr14vp3wy3jpqi5dl6y7n01p2dy4jlgl9bf9x7616r6n";
+    sha256 = "sha256-ZeiCYjxnH0Ath5bB20QHmE8R3wU4/3RiAw2NUhrrKNM=";
   };
 
   makeFlags = [ "DESTDIR=$(out)" "PREFIX=" ];
@@ -26,14 +26,16 @@ in stdenv.mkDerivation {
       EOF
       chmod +x $out/bin/steamdeps
     ''}
-    install -d $out/lib/udev/rules.d
+
-    install -m644 lib/udev/rules.d/*.rules $out/lib/udev/rules.d
+    # this just installs a link, "steam.desktop -> /lib/steam/steam.desktop"
+    rm $out/share/applications/steam.desktop
+    sed -e 's,/usr/bin/steam,steam,g' steam.desktop > $out/share/applications/steam.desktop
   '';
 
   meta = with stdenv.lib; {
     description = "A digital distribution platform";
     homepage = "http://store.steampowered.com/";
     license = licenses.unfreeRedistributable;
-    maintainers = with maintainers; [ jagajaga ];
+    maintainers = with maintainers; [ jagajaga jonringer ];
   };
 }

pkgs/os-specific/linux/kernel/linux-zen.nix

@@ -1,7 +1,7 @@
 { stdenv, fetchFromGitHub, buildLinux, ... } @ args:
 
 let
-  version = "5.9.14";
+  version = "5.10.1";
 in
 
 buildLinux (args // {
@@ -13,11 +13,11 @@ buildLinux (args // {
     owner = "zen-kernel";
     repo = "zen-kernel";
     rev = "v${version}-zen1";
-    sha256 = "1b8pm80z49d7qk9mvdf9w3hih34pilqr1zjk110q5im1kdz81zrg";
+    sha256 = "1c77x53ixyn64b4qq6br6ckicmjs316c8k08yfxibmhv72av1wcp";
   };
 
   extraMeta = {
-    branch = "5.9/master";
+    branch = "5.10/master";
     maintainers = with stdenv.lib.maintainers; [ atemu andresilva ];
   };
 

pkgs/os-specific/linux/libpsm2/default.nix

@@ -2,8 +2,7 @@
 
 stdenv.mkDerivation rec {
   pname = "libpsm2";
-  version = "11.2.156";
+  version = "11.2.185";
-  ifs_version = "10_10_2_0_44";
 
   preConfigure= ''
     export UDEVDIR=$out/etc/udev
@@ -14,7 +13,7 @@ stdenv.mkDerivation rec {
 
   buildInputs = [ numactl pkgconfig ];
 
-  installFlags = [ 
+  installFlags = [
     "DESTDIR=$(out)"
     "UDEVDIR=/etc/udev"
     "LIBPSM2_COMPAT_CONF_DIR=/etc"
@@ -23,8 +22,8 @@ stdenv.mkDerivation rec {
   src = fetchFromGitHub {
     owner = "intel";
     repo = "opa-psm2";
-    rev = "IFS_RELEASE_${ifs_version}";
+    rev = "PSM2_${version}";
-    sha256 = "0ckrfzih1ga9yvximxjdh0z05kn9l858ykqiblv18w6ka3gra1xz";
+    sha256 = "062hg4r6gz7pla9df70nqs5i2a3mp1wszmp4l0g771fykhhrxsjg";
   };
 
   postInstall = ''

pkgs/tools/filesystems/glusterfs/default.nix

@@ -1,25 +1,17 @@
-{stdenv, fetchurl, fuse, bison, flex_2_5_35, openssl, python3, ncurses, readline,
+{stdenv, fetchFromGitHub, fuse, bison, flex_2_5_35, openssl, python3, ncurses, readline,
  autoconf, automake, libtool, pkgconfig, zlib, libaio, libxml2, acl, sqlite,
  liburcu, attr, makeWrapper, coreutils, gnused, gnugrep, which,
  openssh, gawk, findutils, util-linux, lvm2, btrfs-progs, e2fsprogs, xfsprogs, systemd,
  rsync, glibc, rpcsvc-proto, libtirpc
 }:
 let
-  s =
+  # NOTE: On each glusterfs release, it should be checked if gluster added
-  rec {
+  #       new, or changed, Python scripts whose PYTHONPATH has to be set in
-    baseName="glusterfs";
+  #       `postFixup` below, and whose runtime deps need to go into
-    # NOTE: On each glusterfs release, it should be checked if gluster added
+  #       `nativeBuildInputs`.
-    #       new, or changed, Python scripts whose PYTHONPATH has to be set in
+  #       The command
-    #       `postFixup` below, and whose runtime deps need to go into
+  #         find /nix/store/...-glusterfs-.../ -name '*.py' -executable
-    #       `nativeBuildInputs`.
+  #       can help with finding new Python scripts.
-    #       The command
-    #         find /nix/store/...-glusterfs-.../ -name '*.py' -executable
-    #       can help with finding new Python scripts.
-    version = "7.6";
-    name="${baseName}-${version}";
-    url="https://github.com/gluster/glusterfs/archive/v${version}.tar.gz";
-    sha256 = "0zdcv2jk8dp67id8ic30mkn97ccp07jf20g7v09a5k31pw9aqyih";
-  };
 
   buildInputs = [
     fuse bison flex_2_5_35 openssl ncurses readline
@@ -60,16 +52,17 @@ let
     which # which
     xfsprogs # xfs_info
   ];
-in
+in stdenv.mkDerivation rec {
-stdenv.mkDerivation
+  pname = "glusterfs";
-{
+  version = "8.3";
-  inherit (s) name version;
-  inherit buildInputs propagatedBuildInputs;
 
-  patches = [
+  src = fetchFromGitHub {
-    # Remove when https://bugzilla.redhat.com/show_bug.cgi?id=1489610 is fixed
+    owner = "gluster";
-    ./glusterfs-fix-bug-1489610-glusterfind-var-data-under-prefix.patch
+    repo = pname;
-  ];
+    rev = "v${version}";
+    sha256 = "09vvbymiacz2pzwnq6f2dd7g2zszzsivdncz45sh977v3z0n84az";
+  };
+  inherit buildInputs propagatedBuildInputs;
 
   postPatch = ''
     sed -e '/chmod u+s/d' -i contrib/fuse-util/Makefile.am
@@ -91,7 +84,7 @@ stdenv.mkDerivation
   # but fails when the version is empty.
   # See upstream GlusterFS bug https://bugzilla.redhat.com/show_bug.cgi?id=1452705
   preConfigure = ''
-    echo "v${s.version}" > VERSION
+    echo "v${version}" > VERSION
     ./autogen.sh
     export PYTHON=${python3}/bin/python
     '';
@@ -109,7 +102,7 @@ stdenv.mkDerivation
   postInstall = ''
     cp -r $out/$out/* $out
     rm -r $out/nix
-    '';
+  '';
 
   postFixup = ''
     # glusterd invokes `gluster` and other utilities when telling other glusterd nodes to run commands.
@@ -153,7 +146,7 @@ stdenv.mkDerivation
     wrapProgram $out/share/glusterfs/scripts/eventsdash.py --set PATH "$GLUSTER_PATH" --set PYTHONPATH "$GLUSTER_PYTHONPATH" --set LD_LIBRARY_PATH "$GLUSTER_LD_LIBRARY_PATH"
     wrapProgram $out/libexec/glusterfs/glusterfind/brickfind.py --set PATH "$GLUSTER_PATH" --set PYTHONPATH "$GLUSTER_PYTHONPATH" --set LD_LIBRARY_PATH "$GLUSTER_LD_LIBRARY_PATH"
     wrapProgram $out/libexec/glusterfs/glusterfind/changelog.py --set PATH "$GLUSTER_PATH" --set PYTHONPATH "$GLUSTER_PYTHONPATH" --set LD_LIBRARY_PATH "$GLUSTER_LD_LIBRARY_PATH"
-    '';
+  '';
 
   doInstallCheck = true;
 
@@ -187,12 +180,7 @@ stdenv.mkDerivation
     rm -r $out/bin/conf.py
     '';
 
-  src = fetchurl {
-    inherit (s) url sha256;
-  };
-
   meta = with stdenv.lib; {
-    inherit (s) version;
     description = "Distributed storage system";
     homepage = "https://www.gluster.org";
     license = licenses.lgpl3Plus; # dual licese: choice of lgpl3Plus or gpl2

pkgs/tools/filesystems/glusterfs/glusterfs-fix-bug-1489610-glusterfind-var-data-under-prefix.patch

@@ -1,27 +0,0 @@
-From f523afac49e24ecc0fa4ad85195135689cf445f0 Mon Sep 17 00:00:00 2001
-From: =?UTF-8?q?Niklas=20Hamb=C3=BCchen?= <mail@nh2.me>
-Date: Wed, 27 Sep 2017 21:36:41 +0200
-Subject: [PATCH] Fix "glusterfind saves var data under $prefix instead of
- localstatedir". Fixes #1489610
-
-Change-Id: Id2362c20f34346c37acfb9eb1ad105d0b7b8b60f
----
- configure.ac | 2 +-
- 1 file changed, 1 insertion(+), 1 deletion(-)
-
-diff --git a/configure.ac b/configure.ac
-index f87d8a454..b4d3f5d10 100644
---- a/configure.ac
-+++ b/configure.ac
-@@ -1118,7 +1118,7 @@ if test "x$exec_prefix" = xNONE; then
- 	exec_prefix="$(eval echo $prefix)"
- fi
- GLUSTERFS_LIBEXECDIR="$(eval echo $libexecdir)/glusterfs"
--GLUSTERFSD_MISCDIR="$(eval echo $prefix)/var/lib/misc/glusterfsd"
-+GLUSTERFSD_MISCDIR="$(eval echo $localstatedir)/lib/misc/glusterfsd"
- prefix=$old_prefix
- exec_prefix=$old_exec_prefix
-
---
-2.12.0
-

pkgs/tools/security/neopg/default.nix

@@ -44,5 +44,6 @@ stdenv.mkDerivation rec {
     '';
     maintainers = with maintainers; [ erictapen ];
     platforms = platforms.linux;
+    broken = true; # fails to build with recent versions of botan. https://github.com/das-labor/neopg/issues/98
   };
 }

pkgs/top-level/all-packages.nix

@@ -5091,6 +5091,8 @@ in
 
   keyfuzz = callPackage ../tools/inputmethods/keyfuzz { };
 
+  keystore-explorer = callPackage ../applications/misc/keystore-explorer { };
+
   kibana6 = callPackage ../development/tools/misc/kibana/6.x.nix { };
   kibana6-oss = callPackage ../development/tools/misc/kibana/6.x.nix {
     enableUnfree = false;
@@ -9033,6 +9035,8 @@ in
 
   fasmg = callPackage ../development/compilers/fasmg { };
 
+  flasm = callPackage ../development/compilers/flasm { };
+
   flyctl = callPackage ../development/web/flyctl { };
 
   flutterPackages =
@@ -10553,19 +10557,16 @@ in
   octave = callPackage ../development/interpreters/octave {
     python = python3;
     mkDerivation = stdenv.mkDerivation;
-    jdk = jdk8; # TODO: remove override https://github.com/NixOS/nixpkgs/pull/89731
   };
   octave-jit = callPackage ../development/interpreters/octave {
     python = python3;
     enableJIT = true;
     mkDerivation = stdenv.mkDerivation;
-    jdk = jdk8; # TODO: remove override https://github.com/NixOS/nixpkgs/pull/89731
   };
   octaveFull = libsForQt5.callPackage ../development/interpreters/octave {
     python = python3;
     enableQt = true;
     overridePlatforms = ["x86_64-linux" "x86_64-darwin"];
-    jdk = jdk8; # TODO: remove override https://github.com/NixOS/nixpkgs/pull/89731
   };
 
   ocropus = callPackage ../applications/misc/ocropus { };
@@ -16017,6 +16018,8 @@ in
 
   soapyairspy = callPackage ../applications/radio/soapyairspy { };
 
+  soapyaudio = callPackage ../applications/radio/soapyaudio { };
+
   soapybladerf = callPackage ../applications/radio/soapybladerf { };
 
   soapyhackrf = callPackage ../applications/radio/soapyhackrf { };
@@ -16029,6 +16032,7 @@ in
     extraPackages = [
       limesuite
       soapyairspy
+      soapyaudio
       soapybladerf
       soapyhackrf
       soapyremote
@@ -16184,10 +16188,6 @@ in
     python = python3;
   };
 
-  sundials_2 = callPackage ../development/libraries/sundials/2.x.nix {
-    python = python3;
-  };
-
   sutils = callPackage ../tools/misc/sutils { };
 
   svrcore = callPackage ../development/libraries/svrcore { };

pkgs/top-level/release-alternatives.nix

@@ -9,7 +9,7 @@ let
   blasUsers = [
     # "julia_07" "julia_10" "julia_11" "julia_13" "octave" "octaveFull"
     "fflas-ffpack" "linbox" "R" "ipopt" "hpl" "rspamd" "octopus"
-    "sundials" "sundials_2" "superlu" "suitesparse_5_3" "suitesparse_4_4"
+    "sundials" "superlu" "suitesparse_5_3" "suitesparse_4_4"
     "suitesparse_4_2" "scs" "scalapack" "petsc" "cholmod-extra"
     "arpack" "qrupdate" "libcint" "iml" "globalarrays" "arrayfire" "armadillo"
     "xfitter" "lammps" "plink-ng" "quantum-espresso" "siesta"