import os
import json
import networkx as nx
from repository.file_system_repository import FileSystemRepository


class GraphProcessor:
    file_path: str
    graph = None

    def __init__(self, file_path: str):
        self.file_path = file_path
        self.graph = self.load_graph_from_json()

    def load_graph_from_json(self):
        with open(self.file_path, "r") as file:
            data = json.load(file)

        G = nx.Graph()

        if "matrix" in data:
            matrix = data["matrix"]
            for part1, neighbors in matrix.items():
                for neighbor in neighbors:
                    G.add_edge(part1, neighbor)

        return G


class EdgeBetweensClustering:
    def __init__(self, graph):
        self.graph = graph.copy()
        self.clusters = []

    def cluster(self):
        while self.graph.number_of_edges() > 0:
            edge_betweens = nx.edge_betweenness_centrality(self.graph)
            max_betweens_edge = max(edge_betweens, key=edge_betweens.get)
            self.graph.remove_edge(*max_betweens_edge)
            components = list(nx.connected_components(self.graph))
            if components not in self.clusters:
                self.clusters.append(components)
        return []

    def get_clusters(self):
        return self.clusters


class ClusterisationSequenceUseCase:
    def call(self, file_path: str):
        graph_processor = GraphProcessor(file_path + "adjacency_matrix.json")
        G = graph_processor.load_graph_from_json()
        ebc = EdgeBetweensClustering(G)
        ebc.cluster()
        clusters = ebc.get_clusters()

        for i in range(len(clusters)):
            for j in range(len(clusters[i])):
                clusters[i][j] = list(clusters[i][j])

        FileSystemRepository.writeFile(
            json.dumps(clusters, ensure_ascii=False, indent=2),
            file_path,
            "assembly_sequence.json",
        )
        return clusters